PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0006s0860.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 143aa    MW: 16189.6 Da    PI: 7.9644
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0006s0860.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.58.2e-192171356
                     AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                            y+G+r+++ +g+++AeIrdp+ ng  +r +lg+f+t+eeAa+a+++a+ +++g+
  SapurV1A.0006s0860.1.p 21 YRGIRRRP-WGKFAAEIRDPTRNG--ARRWLGTFDTEEEAARAYDRAAFAFRGH 71
                            9*******.**********98887..*************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.63E-232079IPR016177DNA-binding domain
PROSITE profilePS5103224.6712078IPR001471AP2/ERF domain
SMARTSM003801.7E-352084IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-302080IPR001471AP2/ERF domain
PRINTSPR003672.3E-102132IPR001471AP2/ERF domain
PfamPF008476.5E-132171IPR001471AP2/ERF domain
CDDcd000184.41E-292179No hitNo description
PRINTSPR003672.3E-104460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
METHRGEKSS KKQGKGRENA YRGIRRRPWG KFAAEIRDPT RNGARRWLGT FDTEEEAARA  60
YDRAAFAFRG HLAILNFPNE YHHQDPNFTK SSASSSSFST ENPSSYGHEA SSTGGQEVIE  120
FEYLDNKLLE ELLGTHDHSR QL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-272178663ATERF1
3gcc_A8e-272178663ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11027KKQGKGRENAYRGIRRRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011028794.18e-79PREDICTED: ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC53e-45ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLB9H8L01e-78B9H8L0_POPTR; Uncharacterized protein
STRINGPOPTR_0005s24450.14e-78(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27033215
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.14e-34ERF family protein